新規リベロマイシン誘導体の創出~マラリア原虫に効果が期待される有用化合物の生産~

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2025-07-02 理化学研究所

理化学研究所などの国際共同研究グループは、放線菌 Actinacidiphila reveromycinica のリベロマイシンA(RM-A)生合成遺伝子クラスターにおいて、シトクロムP450 RevI酵素の部位特異的変異(A241L)を導入し、酸性条件下でも安定な新規RM誘導体(17‑hydroxy‑RM‑Tと17‑hemisuccinyloxy‑RM‑T)を創出しました。これらは細胞毒性が低く、特に17‑hydroxy‑RM‑Tはマラリア原虫の増殖を低濃度で抑制(IC₅₀=0.09 μM)、17‑hemisuccinyloxy‑RM‑Tは酸性条件下で骨髄腫細胞の増殖を抑制する効果を示しました。X線結晶構造解析やUHPLC‑MSによる酵素反応確認も行われ、RevI変異が水酸化位置選択性を変えるメカニズムが解明されています。本成果は『Chemical Science』に掲載され、天然物を基とした創薬シーズの拡張と、新規抗マラリア薬開発に向けた重要なステップとなります。

新規リベロマイシン誘導体の創出~マラリア原虫に効果が期待される有用化合物の生産~
二つの新規RM誘導体の構造

<関連情報>

チトクロームP450revIの位置選択性を変化させたレベロマイシン誘導体の生合成 Biosynthesis of reveromycin derivatives by altering the regioselectivity of cytochrome P450revI

Ya Fen Yong, Song Liu, Katsuyuki Sakai, Keisuke Fujiyama, Hiroshi Takagi,Yushi Futamura, Takeshi Shimizu, Hiroyuki Osada, Eugene Boon Beng Ong and Shunji Takahashi
Chemical Science  Published:23 Jun 2025
DOI:https://doi.org/10.1039/D5SC01355K

Abstract

Reveromycin A (RM-A) (1) has a 6,6-spiroacetal core structure that is important for its biological activity. However, 1 undergoes a spiroacetal rearrangement to form RM-B (2) with a 5,6-spiroacetal core, which exhibits reduced bioactivity. This undesired rearrangement is partly due to the hemisuccinate moiety at the C18 position of 1. In 1 biosynthesis, P450revI catalyses the C18-hydroxylation of RM-T (3), which is essential for its subsequent hemisuccinylation to generate 1. In this study, we aimed to alter the P450revI regioselectivity to improve the stability of the 6,6-spiroacetal core and expand the structural diversity of RMs. Candidate amino acid residues for mutagenesis studies were selected by comparing the co-crystal structure of P450revI with the docking models of the P450revI mutant-3 complexes. Notably, the P450revI-A241L mutant selectively produced novel RM derivatives. Nuclear magnetic resonance analysis revealed that P450revI-A241L catalysed the C17-hydroxylation of 3 to produce 17-hydroxy-RM-T (6). Co-crystal structure analysis of the P450revI-A241L-3 complex revealed that the pro-R hydrogen at the C17 position faces toward the haem iron. Introduction of the P450revI-A241L mutant gene into the Actinacidiphila reveromycinica SN-593-ΔrevI strain led to the production of 17-hemisuccinyloxy-RM-T (7). After the successful bioproduction of RM derivatives, we evaluated their structural stabilities and biological activities. Compounds 6 and 7 exhibited better stabilities than 18-hydroxylated-3 (RM-T1; 4) and 1, respectively. Biological activity analysis revealed that 6 and 7 exhibited anti-malarial and anti-multiple myeloma activities, respectively, comparable to those of 1 and 3, while showing low cytotoxicity against human cell lines. Overall, this study highlights the potential of RM derivatives as pharmaceuticals.

Graphical abstract: Biosynthesis of reveromycin derivatives by altering the regioselectivity of cytochrome P450revI

有機化学・薬学
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