2024-07-22 パシフィック・ノースウェスト国立研究所(PNNL)
<関連情報>
- https://www.pnnl.gov/publications/enormous-diversity-and-biogeochemical-potential-contained-within-soil-virosphere
- https://www.nature.com/articles/s41564-024-01686-x
土壌ウイルスのグローバルアトラスが明らかにする未踏の生物多様性と潜在的な生物地球化学的影響 A global atlas of soil viruses reveals unexplored biodiversity and potential biogeochemical impacts
Emily B. Graham,Antonio Pedro Camargo,Ruonan Wu,Russell Y. Neches,Matt Nolan,David Paez-Espino,Nikos C. Kyrpides,Janet K. Jansson,Jason E. McDermott,Kirsten S. Hofmockel & the Soil Virosphere Consortium
Nature Microbiology Published:20 June 2024
DOI:https://doi.org/10.1038/s41564-024-01686-x
Abstract
Historically neglected by microbial ecologists, soil viruses are now thought to be critical to global biogeochemical cycles. However, our understanding of their global distribution, activities and interactions with the soil microbiome remains limited. Here we present the Global Soil Virus Atlas, a comprehensive dataset compiled from 2,953 previously sequenced soil metagenomes and composed of 616,935 uncultivated viral genomes and 38,508 unique viral operational taxonomic units. Rarefaction curves from the Global Soil Virus Atlas indicate that most soil viral diversity remains unexplored, further underscored by high spatial turnover and low rates of shared viral operational taxonomic units across samples. By examining genes associated with biogeochemical functions, we also demonstrate the viral potential to impact soil carbon and nutrient cycling. This study represents an extensive characterization of soil viral diversity and provides a foundation for developing testable hypotheses regarding the role of the virosphere in the soil microbiome and global biogeochemistry.
