CRISPRを超える可能性を秘めた分子マシンの設計図(Blueprints for a molecular machine more powerful than CRISPR)

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2025-09-04 パデュー大学

パデュー大学の研究チームは、CRISPRを超える可能性を持つ新たな分子機械の青写真を提示した。これはDNA切断を伴わずに配列を挿入できるトランスポゾン由来の仕組みを基盤とし、従来のCRISPRで問題となる修復過程のエラーや細胞損傷を回避できる点が強みとされる。構造解析により分子の働きを詳細に解明し、より安全かつ効率的なゲノム編集の実現が期待されている。また、この研究はCRISPRの限界を補う技術として、医学応用や農業分子育種など幅広い分野での活用が見込まれる。今後は、他の新規システム(例:PAM依存性がなく小型なTIGR-Tas)の開発とも並行し、ゲノム編集の精度と応用範囲を大きく拡張する可能性がある。

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TnsABCDトランスポゾソームの構造解析が解明する標的DNA転移のメカニズム Structure of TnsABCD transpososome reveals mechanisms of targeted DNA transposition

Shukun Wang ∙ Romana Siddique ∙ Mark C. Hall ∙ Phoebe A. Rice ∙ Leifu Chang
Cell  Published:October 8, 2024
DOI:https://doi.org/10.1016/j.cell.2024.09.023

Graphical abstract

CRISPRを超える可能性を秘めた分子マシンの設計図(Blueprints for a molecular machine more powerful than CRISPR)

Highlights

  • Cryo-EM structure of the TnsC-TnsD-att DNA shows DNA bending featured by intercalation
  • TnsABCD transpososome structure reveals TnsB recruitment to TnsC via TnsB’s C-tail
  • TnsC’s C-tail directly participates in TnsAB-DNA strand-transfer complex assembly
  • Structural details of the active sites of TnsA and TnsB within the transpososome

Summary

Tn7-like transposons are characterized by their ability to insert specifically into host chromosomes. Recognition of the attachment (att) site by TnsD recruits the TnsABC proteins to form the transpososome and facilitate transposition. Although this pathway is well established, atomic-level structural insights of this process remain largely elusive. Here, we present the cryo-electron microscopy (cryo-EM) structures of the TnsC-TnsD-att DNA complex and the TnsABCD transpososome from the Tn7-like transposon in Peltigera membranacea cyanobiont 210A, a type I-B CRISPR-associated transposon. Our structures reveal a striking bending of the att DNA, featured by the intercalation of an arginine side chain of TnsD into a CC/GG dinucleotide step. The TnsABCD transpososome structure reveals TnsA-TnsB interactions and demonstrates that TnsC not only recruits TnsAB but also directly participates in the transpososome assembly. These findings provide mechanistic insights into targeted DNA insertion by Tn7-like transposons, with implications for improving the precision and efficiency of their genome-editing applications.

 

I-B型CRISPRエフェクターによるTn7様トランスポゾン動員分子機構 Molecular mechanism for Tn7-like transposon recruitment by a type I-B CRISPR effector

Shukun Wang ∙ Clinton Gabel ∙ Romana Siddique ∙ Thomas Klose ∙ Leifu Chang
Cell  Published:August 8, 2023
DOI:https://doi.org/10.1016/j.cell.2023.07.010

Highlights

  • Biochemical reconstitution and discovery of Cas11 in type I-B2 PmcCAST
  • Cryo-EM structure of the Cascade-DNA-TniQ-TnsC recruitment complex
  • Target DNA binding promotes conformational changes in Cascade to recruit TniQ
  • TniQ binds to the seam region of the TnsC spiral heptamer

Summary

Tn7-like transposons have co-opted CRISPR-Cas systems to facilitate the movement of their own DNA. These CRISPR-associated transposons (CASTs) are promising tools for programmable gene knockin. A key feature of CASTs is their ability to recruit Tn7-like transposons to nuclease-deficient CRISPR effectors. However, how Tn7-like transposons are recruited by diverse CRISPR effectors remains poorly understood. Here, we present the cryo-EM structure of a recruitment complex comprising the Cascade complex, TniQ, TnsC, and the target DNA in the type I-B CAST from Peltigera membranacea cyanobiont 210A. Target DNA recognition by Cascade induces conformational changes in Cas6 and primes TniQ recruitment through its C-terminal domain. The N-terminal domain of TniQ is bound to the seam region of the TnsC spiral heptamer. Our findings provide insights into the diverse mechanisms for the recruitment of Tn7-like transposons to CRISPR effectors and will aid in the development of CASTs as gene knockin tools.

細胞遺伝子工学
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