8種のクジラ類の腸内メタゲノム解析に成功~タコ墨ならぬクジラ墨「綱火」のメカニズム解明に貢献か~

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2025-08-28 北海道大学

北海道大学の研究グループ(竹内颯氏、早川卓志助教、松石隆教授ら)は、北海道沿岸に漂着した8種のクジラ類の腸管内容物を対象に世界初の網羅的メタゲノム解析を行い、腸内細菌の組成と機能を明らかにしました。その結果、マッコウクジラ上科(マッコウクジラ、コマッコウ)に特有の防御行動として知られる暗赤褐色の便「綱火(つなび)」に関与する可能性のある色素・重金属代謝関連遺伝子を発見しました。研究チームは、この現象を「腸内に取り込まれた有毒な重金属を細菌が解毒処理する副産物が色素となり、結果的に防御墨として機能している」という仮説で説明しています。つまり、クジラと腸内細菌の共生関係が防御行動を進化させた可能性を示唆する成果です。本研究は、クジラの消化生理や腸内微生物との相互作用の理解を進めるとともに、動物の行動進化を腸内細菌の観点から探る新しい研究の端緒となります。成果は2025年8月8日付で Ecology and Evolution に掲載されました。

8種のクジラ類の腸内メタゲノム解析に成功~タコ墨ならぬクジラ墨「綱火」のメカニズム解明に貢献か~
左写真:マッコウクジラの暗褐色の便である「綱火」。(提供:向井大河氏)
右図:マッコウクジラとコマッコウの腸管の模式図と内容物を採取した部位。

<関連情報>

メタゲノム解析によるマッコウクジラ上科の防御墨「綱火」における腸内微生物の役割の解明 Metagenomic Insights Into the Role of Gut Microbes in the Defensive Ink “Tsunabi” of Physeteroid Whales

Hayate Takeuchi, Takashi Fritz Matsuishi, Takashi Hayakawa
Ecology and Evolution  Published: 08 August 2025
DOI:https://doi.org/10.1002/ece3.71910

ABSTRACT

Whales of the superfamily Physeteroidea, which includes the genera Physeter and Kogia, exhibit a unique visual defense mechanism involving the release of dark reddish-brown feces (locally called “tsunabi-ink” in Japan) into the water to obscure themselves from predators and other threats. However, the mechanism underlying pigmentation remains unknown. Because physeteroids possess an enlarged distal colon that retains fecal material, a possible explanation is that symbiont microbial metabolism contributes to the feces pigmentation. To investigate this, we provided a shotgun metagenomic catalog of gut microbiomes from the intestinal tracts of eight cetacean species, including two physeteroids: a sperm whale (Physeter macrocephalus) and a pygmy sperm whale (Kogia breviceps). The colonic microbiome of physeteroids exhibited relatively high abundances of tryptophan metabolism genes, particularly indolepyruvate ferredoxin oxidoreductases (iorA and iorB), suggesting that physeteroids accumulate indole-3-pyruvate-derived pigments in their colons. Furthermore, bacterial members of the phyla Bacillota and Bacteroidota were identified in the physeteroid colon as primary taxa conferring heavy-metal resistance, which may be related to the primary predation of physeteroids on cephalopods, which bioaccumulate high levels of heavy metals. Prolonged fecal retention can expose gut microbes to chronic heavy-metal stress and colonize them as heavy metal-tolerant microbial communities, some of which may produce pigments to reduce their toxicity. Thus, we propose that tsunabi-ink is a metabolic byproduct of shifts in the gut microbial community, influenced by the host’s digestive physiology and foraging behavior through sustained ecological interactions with gut symbionts. Moreover, we believe that further empirical investigation would validate this hypothesis.

生物環境工学
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