RdDMがゲノム全体の免疫閾値を設定する仕組み(How RdDM Sets Genome-wide Immune Threshold)

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2026-03-19 中国科学院(CAS)

中国科学院遺伝発生生物学研究所の王源研究チームは、植物免疫の「閾値(ベースライン発現)」を制御する仕組みを解明した。大豆ゲノムではトランスポゾンが50%以上を占めるが、本研究はLTRレトロトランスポゾンがRNA誘導DNAメチル化(RdDM)経路により免疫遺伝子の発現調整に利用されることを示した。これらはTNL受容体やEDS1/SAG101近傍に配置され、メチル化によって防御遺伝子を低レベルの待機状態に維持する。抑制が崩れると自己免疫が過剰に活性化し生育障害が発生することも確認された。トランスポゾンが免疫恒常性を保つ調節装置として機能することを示した重要な成果である。

RdDMがゲノム全体の免疫閾値を設定する仕組み(How RdDM Sets Genome-wide Immune Threshold)
RdDM maintains the homeostasis of plant defense in soybean. (Image by IGDB)

<関連情報>

小型RNAによるDNAメチル化は、Pol IVおよびPol Vによってダイズの免疫恒常性を維持する Small RNA–directed DNA methylation by Pol IV and Pol V maintains immune homeostasis in soybean

Ziming Zhang ,Hongda Sun ,Mingwei Wu ,Jinfeng Chen ,Yuan Wang
The Plant Cell  Published:03 March 2026
DOI:https://doi.org/10.1093/plcell/koag033

Abstract

Transposable element (TE) insertions and DNA methylation variability are frequently associated with defense-related genes in Arabidopsis thaliana. Pathogen infections trigger genome-wide DNA demethylation, suggesting a critical role for DNA methylation in immune regulation. However, the precise function of DNA methylation, as a host defense mechanism or a byproduct of pathogenesis, remains unclear, partly due to the weak correlation between methylation and gene expression in Arabidopsis. Here, we show that in soybean (Glycine max), the canonical RNA-directed DNA methylation (RdDM) pathway in soybean, mediated by RNA Polymerases IV (Pol IV) and V (Pol V), plays a central role in preventing premature activation of many key genes in immune response, including genes encoding Nucleotide-binding Leucine-rich Repeat Receptors and components of the ENHANCED DISEASE SUSCEPTIBILITY 1 pathway. In pol iv and pol v mutants, these defense genes are often located near TEs and lose DNA methylation and become activated to levels comparable to those in wild-type plants under pathogen attack. This misregulation drives constitutive immune gene expression and triggers a severe autoimmune phenotype, even in the absence of infection. Moreover, we reveal that RdDM-mediated epigenetic surveillance is dynamically modulated in response to pathogen exposure. These results indicate that RdDM serves as an active regulatory brake that allows plants to fine-tune immune responses.

細胞遺伝子工学
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