第二世代結晶スポンジ法~中分子創薬化合物を標的に「簡便・汎用」な構造解析を実現~

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2025-03-06 東京大学

東京大学の研究チームは、かご型分子を結晶内に固定化した新しい「第二世代結晶スポンジ法」を開発し、従来法の制限を克服しました。この手法により、高極性分子や分子量1,000を超える中分子の構造解析が可能となり、特に中分子医薬の創薬研究において大きな貢献が期待されます。また、試料量をマイクログラム単位に削減し、操作の簡便化と再現性の向上を実現しました。

<関連情報>

S対称性ミスマッチ戦略による結晶性スポンジとしての超分子配位ケージ upramolecular coordination cages as crystalline sponges through a symmetry mismatch strategy

Wei He,Yikuan Yu,Kenta Iizuka,Hiroki Takezawa & Makoto Fujita
Nature Chemistry  Published:05 March 2025
DOI:https://doi.org/10.1038/s41557-025-01750-x

第二世代結晶スポンジ法~中分子創薬化合物を標的に「簡便・汎用」な構造解析を実現~

Abstract

The crystalline sponge method enables single-crystal X-ray diffraction analysis of guests absorbed within single-crystalline porous materials. However, its application with large or highly polar guests remains challenging. In this study, we addressed some of these limitations using palladium-based octahedron-shaped M6L4 (Td) coordination cages as crystalline sponges. The key to facilitate the crystallization of the cage is the addition of large aromatic polysulfonates (‘sticker’ anions); the symmetry mismatch between the cage and the sticker (D2h) results in a low-symmetry space group (P1¯), preventing guest disorder and leading to the formation of guest-accessible channels in the crystal. Guests can be encapsulated either before or after cage crystallization. The size and host–guest properties of the cavity enable analysis of a broad range of compounds, including water-soluble molecules, large amphiphilic molecules (molecular weight of ~1,200) and molecular aggregates. We have demonstrated the versatility of the cage–sticker strategy through its application to a triaugmented triangular-prism-shaped M9L6 cage, extending the guest scope to medium-sized pharmaceutical molecules.

有機化学・薬学
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