古代ゲノムが東アジアの人類先史に光を当てる(Ancient Genomes Shed Light on Human Prehistory in East Asia)

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2025-05-30 中国科学院(CAS)

中国科学院古脊椎動物・古人類研究所の傅喬梅教授らの研究チームは、雲南省で発掘された127体の古代人骨のゲノム解析を通じて、東アジアの人類史に新たな知見をもたらしました。特に、約7,100年前の個体からは、現代東アジア人とは大きく異なる「興義系統」と呼ばれる未確認の祖先系統が特定されました。この系統は、チベット高原の先住民やオーストロアジア語族の起源と関連があり、農耕以前の時代から存在していたことが示唆されています。また、雲南中部の人々は、北部および南部東アジア人とは約19,000年前に分岐した独自の系統を持ち、現代の東南アジアや南アジアのオーストロアジア語族と遺伝的な近縁性を示しました。この研究は、東アジアにおける人類の多様な起源と移動の歴史を解明する上で重要な成果となっています。

<関連情報>

雲南省の先史時代のゲノムから、チベット人やオーストロアジア語族に関連する祖先が明らかになった Prehistoric genomes from Yunnan reveal ancestry related to Tibetans and Austroasiatic speakers

Tianyi Wang, Melinda A. Yang, Zhonghua Zhu, Minmin Ma, […] , and Qiaomei Fu
Science  Published:29 May 2025
DOI:https://doi.org/10.1126/science.adq9792

Editor’s summary

Waves of human migration have resulted in population admixture and turnover across the world, resulting in complex histories that are difficult to untangle without ancient DNA. Wang et al. sequenced 127 ancient humans from southwestern China living 7100 years ago to the present day. In addition to determining finer population dynamics such as contributions of Central Yunnan ancestry to modern Austroasiatic speakers, the authors uncovered a potential representative of a deeply divergent lineage similar to a long-speculated “ghost” population that contributed to Tibetans. This study gives greater insight into the populations that have lived in this area. —Corinne Simonti

Structured Abstract

INTRODUCTION

In East and Southeast Asia, a long history of population movement, replacement, and mixture has heavily influenced the genetic composition of humans up to the present day. For example, early populations found across this region that diversified before 40,000 years ago carrying Basal Asian ancestries have largely been replaced by a single lineage that diversified into the ancestries found in most present-day East and Southeast Asians. However, these ancestries sampled to date have yet to explain the genetic diversity observed across all present-day East and Southeast Asians, with ancestries still uncharacterized in many populations, including in Tibetans and Austroasiatic speakers.

RATIONALE

Sequencing of 127 ancient human genomes dating to 7100 to 1500 years ago from Yunnan province in southwestern China may help to further clarify human population history in East and Southeast Asia. Yunnan is at the intersection of the Tibetan Plateau, Southeast Asia, and southern China and is home to the highest ethnic and linguistic diversity in China today. Thus, genomic sampling of ancient populations from this region provides an opportunity to capture the migration, interaction, and change over time in prehistoric populations of East and Southeast Asia.

RESULTS

Analysis of a 7100-year-old individual from the Xingyi archaeological site in central Yunnan revealed a previously unsampled Basal Asian ancestry that is deeply diverged from East Asian ancestries and persisted in southern East Asia into the mid-Holocene. This Basal Asian Xingyi ancestry is also related to deeply diverged ghost ancestry found in Tibetan Plateau populations, providing new information for studying the origin of Tibetan Plateau populations. The 5500- to 1500-year-old populations from central Yunnan do not show Basal Asian Xingyi ancestry, but carry an East Asian ancestry distinct from northern and southern East Asian ancestries previously characterized, denoted here as Central Yunnan ancestry. This distinct East Asian ancestry can be found across present-day Austroasiatic speakers, indicating that these ancient populations in central Yunnan were likely a proto-Austroasiatic population. By contrast, 3800- to 1700-year-old populations from western Yunnan primarily have northern East Asian ancestry, whereas a 3400-year-old population from eastern Yunnan shows a mixture of southern East Asian and Central Yunnan ancestries. Collectively, these patterns indicate that multiple diverse East Asian ancestries coexisted in Bronze Age Yunnan populations.

CONCLUSION

Sampling ancient humans from Yunnan province, we discovered a new Basal Asian ancestry that is closely related to a “ghost” ancestry that influenced populations who lived on the Tibetan Plateau. In addition, we found a distinct East Asian ancestry that sheds light on the origin of Austroasiatic populations. Multiple East Asian ancestries in Yunnan during the Bronze Age reveal high human genetic diversity and dynamic population movements across East and Southeast Asia.

OPEN IN VIEWER古代ゲノムが東アジアの人類先史に光を当てる(Ancient Genomes Shed Light on Human Prehistory in East Asia)

Population migration, replacement, and the preservation of deeply diverged ancestry in southern East Asia.

A 7100-year-old individual from Yunnan shows a Basal Asian ancestry that is related to a deeply diverged ghost ancestry contributing to Tibetan Plateau populations. After 5500 years before present (BP), populations in Yunnan exhibited diverse ancestries, including contributions from northern East Asia in western Yunnan, coastal southern East Asia in eastern Yunnan, and a newly identified East Asian lineage in central Yunnan that later contributed to present-day Austroasiatic speakers.

Abstract

The human landscape in East and Southeast Asia is vastly complex, and successful retrieval of genome-wide data from prehistoric humans of southern East Asia is sparse. We successfully sampled 127 ancient human genomes from southwestern China. A 7100-year-old female individual from central Yunnan shows a previously unsampled Basal Asian ancestry related to a ghost population that contributed to Tibetan Plateau populations. Central Yunnan populations dating to 5500 to 1400 years before present show an East Asian ancestry distinct from northern or southern East Asian ancestries that contributed to present-day East and Southeast Asians, particularly Austroasiatic speakers, and emphasizes the importance of the Red River valley for proto-Austroasiatic population history. Diverse Asian ancestries are represented in humans sampled from Yunnan, clarifying past population dynamics related to both Tibetan and Austroasiatic origins.

細胞遺伝子工学
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