腸内マイクロバイオーム進化を左右する要因の解明(Study Sheds New Light on What Drives Evolution of Gut Microbiomes)

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2026-01-26 ノースカロライナ州立大学(NC State)

米ノースカロライナ州立大学の研究チームは、腸内マイクロバイオームの進化が宿主の環境条件と強く結び付いていることを明らかにした。研究では、異なる生息環境や食性を持つ動物種を比較し、腸内微生物群集の構成や機能が、遺伝的要因だけでなく、周囲の環境や食物資源によって大きく左右されることを示した。特に、環境変化に適応する過程で、腸内細菌が代謝機能を進化させ、宿主の栄養利用効率や健康状態に影響を与えることが確認された。この結果は、腸内マイクロバイオームが宿主進化の一部として機能してきたことを示唆しており、環境変動が生物の健康や適応力に及ぼす影響を理解する上で重要な知見を提供する。

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アフリカの草食動物群における腸内微生物叢の多様性に対する系統学的影響 Phylogenetic influence on gut microbiome diversity within an African herbivore community

Rylee Jensen,Erin A. McKenney,James C. Beasley,Claudine C. Cloete,Madeline Melton & Diana J. R. Lafferty
BMC Ecology and Evolution  Published:20 December 2025
DOI:https://doi.org/10.1186/s12862-025-02489-2

腸内マイクロバイオーム進化を左右する要因の解明(Study Sheds New Light on What Drives Evolution of Gut Microbiomes)

Abstract

Background

The microbial community within the gastrointestinal tract, known as the gut microbiome (GMB), is a complex micro-ecosystem that is modulated by the life history and physiological traits of the host as well as environmental conditions experienced by the host. In addition, phylogeny can be an important driver of GMB variability across mammalian species, with closely-related species sharing more similar microbial communities than distantly-related species, an eco-evolutionary pattern known as phylosymbiosis. In this study, we examined GMB diversity across 11 species of large herbivores in Etosha National Park (ENP), Namibia, to determine whether host species exhibit phylosymbiosis and whether different herbivore families host distinct microbial communities. The large herbivore community of ENP is an excellent model system because the herbivore species represent distinct evolutionary lineages and have evolved a variety of gut morphologies, dietary niches, and habitat requirements, all of which shape gut microbial diversity.

Results

While we found no evidence of phylosymbiosis across the greater ENP herbivore community, phylosymbiosis was detected among bovid species based on a positive correlation between microbial relative abundance and host evolutionary divergence times. Our results also revealed distinct microbial membership (e.g., Bacteroides, Treponema, and Alistipes) that distinguished bovid species from elephants and giraffes.

Conclusions

Our study provides new insights into the impact of phylogeny on GMB diversity in a closely-related African herbivore community. In particular, phylosymbiosis patterns observed in bovids but not all herbivore species demonstrates that microbial communities are dynamic and respond to a mixture of host evolutionary strategies and corresponding adaptations.

生物環境工学
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