小胞体にATPを輸送するトランスポーターの構造と分子機構の解明

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2025-05-29 京都大学

京都大学とスウェーデン・ストックホルム大学の研究チームは、ヒト膜タンパク質SLC35B1がATPを細胞質から小胞体内部に輸送するトランスポーターであることを明らかにし、その立体構造と分子機構をクライオ電子顕微鏡を用いて解明しました。小胞体はATPを大量に必要としますが、自身ではATPを生成できないため、SLC35B1の機能解明は小胞体の正常な機能維持に重要です。この成果は、細胞内エネルギー供給の理解を深め、関連する疾患の治療法開発に貢献することが期待されます。

小胞体にATPを輸送するトランスポーターの構造と分子機構の解明
小胞体にATPを輸送する膜タンパク質SLC35B1の立体構造(ER:小胞体、cytosol:細胞質)

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ヒトSLC35B1によるATPの小胞体への段階的輸送 Stepwise ATP translocation into the endoplasmic reticulum by human SLC35B1

Ashutosh Gulati,Do-Hwan Ahn,Albert Suades,Yurie Hult,Gernot Wolf,So Iwata,Giulio Superti-Furga,Norimichi Nomura & David Drew
Nature  Published:21 May 2025
DOI:https://doi.org/10.1038/s41586-025-09069-w

Abstract

ATP generated in the mitochondria is exported by an ADP/ATP carrier of the SLC25 family1. The endoplasmic reticulum (ER) cannot synthesize ATP but must import cytoplasmic ATP to energize protein folding, quality control and trafficking2,3. It was recently proposed that a member of the nucleotide sugar transporter family, termed SLC35B1 (also known as AXER), is not a nucleotide sugar transporter but a long-sought-after ER importer of ATP4. Here we report that human SLC35B1 does not bind nucleotide sugars but indeed executes strict ATP/ADP exchange with uptake kinetics consistent with the import of ATP into crude ER microsomes. A CRISPR–Cas9 cell-line knockout demonstrated that SLC35B1 clusters with the most essential SLC transporters for cell growth, consistent with its proposed physiological function. We have further determined seven cryogenic electron microscopy structures of human SLC35B1 in complex with an Fv fragment and either bound to an ATP analogue or ADP in all major conformations of the transport cycle. We observed that nucleotides were vertically repositioned up to approximately 6.5 Å during translocation while retaining key interactions with a flexible substrate-binding site. We conclude that SLC35B1 operates by a stepwise ATP translocation mechanism, which is a previously undescribed model for substrate translocation by an SLC transporter.

生物化学工学
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