スプルース属植物は交雑しても種としてのアイデンティティをどのように維持するのかを解明(Study Reveals How Spruce Species Maintain Their Identity Despite Hybridization)

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2026-08-24 中国科学院(CAS)

中国科学院西双版納熱帯植物園(XTBG)と蘭州大学の研究チームは、チベット高原で自然交雑するトウヒ属3変種(Picea likiangensis)のゲノム解析から、近縁分類群が交雑後も遺伝的な独自性を維持する仕組みを明らかにした。23集団・193個体の全ゲノムを解析し、非同義変異と同義変異の比率を示す新指標「relative hybrid index(ωH)」を導入した。ωHは全集団で1未満となり、タンパク質機能を変える非同義変異が、自然選択によって交雑ゲノムから選択的に排除されていることが示された。特にP. likiangensis var. rubescensの中心分布域に近い集団ではωHが0.26まで低下し、局所適応を損なう遺伝子流動に対する強い淘汰が確認された。また、組換え率の低いゲノム領域ほど遺伝子浸透が制限され、ゲノム構造も種境界の維持に関与することが示唆された。

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変異の異なる導入により、トウヒにおける選択が明らかになる Differential introgression of mutations reveals selection in spruce

Dafu Ru,Hui Zhu,Zhiqiang Lu & Yongshuai Sun
BMC Biology  Published:13 July 2026
DOI:https://doi.org/10.1186/s12915-026-02684-7  Early provide

Abstract

Background
Natural selection plays a pivotal role in maintaining genetic boundaries by counteracting the potentially deleterious effects of alleles introduced through hybridization. Here, we investigated this process through a comparative population genomic analysis of three endemic varieties of Picea likiangensis (vars. likiangensis, linzhiensis, and rubescens) across the Qinghai-Tibetan Plateau (QTP) and adjacent regions.

Results
Leveraging genome-wide single nucleotide polymorphism (SNP) data from 193 individuals, we documented pervasive genetic admixture among these taxa, yet observed a pronounced asymmetric pattern of introgression: synonymous polymorphisms (Hs) exhibited significantly higher introgression levels than non-synonymous polymorphisms (Hn). This pattern indicates that purifying selection may actively eliminate maladaptive non-synonymous mutations, whereas neutrally evolving loci continue to undergo gene flow. Moreover, the relative hybrid index (ωH = Hn/Hs) was lower in populations adjacent to pure rubescens stands, suggesting stronger selection against introgressed alleles in the core range of the recipient taxon rather than a simple effect of geographic distance. In addition, recombination rate was significantly associated with introgression bias, implying that recombination facilitates the removal of maladaptive genomic segments following hybridization.

Conclusions
Our findings underscore the pivotal role of comparative population genomics in elucidating how natural selection shapes introgression and contributes to the maintenance of genetic boundaries during speciation.

細胞遺伝子工学
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