タイプV CRISPRシステムの起源に関わるRNA分割メカニズムを解明(Scientists Reveal Functional RNA Splitting Mechanism Behind Origin of Type V CRISPR Systems)

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2025-09-29 中国科学院(CAS)

中国科学院遺伝・発育生物学研究所のGAO Caixia教授らは、Type V CRISPR-Cas(Cas12)系の起源を解明し、その進化を導いたRNA分割メカニズムを発見した。研究チームはTnpB核酸分解酵素とCas12の共通構造・配列を比較し、両者の中間型「TranC」群を特定。TranCは転移因子由来RNA(reRNA)とCRISPR RNAの両方を利用する二重ガイド機構を持ち、RNAがtracrRNAとcrRNAに分割されたことがCas12進化の鍵であることを突き止めた。人工的にreRNAを分割するとTnpBがCRISPR様機能を獲得することも確認。成果は『Cell』誌に掲載。

タイプV CRISPRシステムの起源に関わるRNA分割メカニズムを解明(Scientists Reveal Functional RNA Splitting Mechanism Behind Origin of Type V CRISPR Systems)
Discovery of TranC systems reveals the molecular mechanism of CRISPR origin (Image by IGDB)

<関連情報>

機能的なRNA分割は、トランスポゾンからV型CRISPR-Casシステムの進化的出現を促した Functional RNA splitting drove the evolutionary emergence of type V CRISPR-Cas systems from transposons

Shuai Jin ∙ Zixu Zhu ∙ Yunjia Li ∙ … ∙ Yong E. Zhang ∙ Jun-Jie Gogo Liu ∙ Caixia Gao
Cell  Published:September 29, 2025
DOI:https://doi.org/10.1016/j.cell.2025.09.004

Highlights

  • TranC systems are evolutionary intermediates between transposons and Cas12 effectors
  • TranCs mediate DNA cleavage guided by both reRNAs and CRISPR RNAs
  • Cryo-EM structures reveal a split guide RNA architecture composed of tracrRNA and crRNA
  • Functional RNA splitting represents a key step in the evolution of type V CRISPR immunity

Summary

Transposon-encoded TnpB nucleases gave rise to type V CRISPR-Cas12 effectors through multiple independent domestication events. These systems use different RNA molecules as guides for DNA targeting: transposon-derived right-end RNAs (reRNAs or omega RNAs) for TnpB and CRISPR RNAs for type V CRISPR-Cas systems. However, the molecular mechanisms bridging transposon activity and CRISPR immunity remain unclear. We identify TranCs (transposon-CRISPR intermediates) derived from distinct IS605- or IS607-TnpB lineages. TranCs utilize both CRISPR RNAs and reRNAs to direct DNA cleavage. The cryoelectron microscopy (cryo-EM) structure of LaTranC from Lawsonibacter sp. closely resembles that of the ISDra2 TnpB complex; however, unlike a single-molecule reRNA, the LaTranC guide RNA is functionally split into a tracrRNA and crRNA. An engineered RNA split of ISDra2 TnpB enabled activity with a CRISPR array. These findings indicate that functional RNA splitting was the primary molecular event driving the emergence of diverse type V CRISPR-Cas systems from transposons.

細胞遺伝子工学
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