サメのDNAが老化の仕組みを解明する手掛かりに(Shark DNA could hold answers to how we age)

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2026-08-21 ジョージア大学(UGA)

米ジョージア大学(UGA)の研究チームは、シマウマザメのDNAメチル化パターンを利用して年齢を推定する「エピジェネティック・クロック」を開発し、サメでは初となる実証に成功した。南東部の水族館で飼育される50匹以上のシマウマザメから血液試料を採取し、全ゲノムを解析することなく、わずか10個のDNA化学修飾マーカーから年齢を推定。推定値は実年齢からおおむね2年以内で、野生個体でも約3~4年の範囲に収まった。DNAパターンの変化は性成熟前の若い個体で特に速く、成体になると緩やかになることも判明し、脊椎動物で老化機構に共通性がある可能性を示した。従来の脊椎骨の成長輪による年齢判定と異なり、動物を殺傷せずに年齢構成を把握できるため、サメなど脆弱な海洋生物の個体群管理や保全に役立つほか、病気や環境ストレスが分子レベルの老化を促進する影響の評価にも応用できる。

サメのDNAが老化の仕組みを解明する手掛かりに(Shark DNA could hold answers to how we age)
Zebra sharks can live up to 30 years. A new modeling tool can correctly estimate an individual shark’s age to within two years. (Photo courtesy of Ripley’s Aquariums)

<関連情報>

Genome-Wide DNA Methylation Patterns Predict Age in the Zebra Shark (Stegostoma tigrinum) and Provide Insight Into the Evolution of Vertebrate Aging

Samantha L. Bock, Kady Lyons, Lei Yang, Jennifer Wyffels, Lance Adams, Nienke Klerks, Aaron Jeskie, Ellen Leever, Taylor Hartl, Javier Almunia, Dan Peterson, …
Molecular Ecology  Published: 03 April 2026
DOI:https://doi.org/10.1111/mec.70326

ABSTRACT

Epigenomic changes are a hallmark of aging, and DNA methylation (DNAm) has emerged as the most reliable molecular marker of an individual’s age. Genome-wide patterns of age-associated hypo- and hypermethylation have been applied to generate predictive models (i.e., “epigenetic clocks”) capable of estimating chronological age in an increasingly diverse set of species including many mammals, a few birds, a reptile, and several bony fishes. Elasmobranchs (sharks, skates, and rays) are underrepresented in comparative investigations of epigenetic aging despite exhibiting exceptional life history variation, occupying a key basal position in the vertebrate phylogeny, and encompassing a large proportion of threatened species lacking accurate, non-lethal age determination methods. Here, we characterize epigenome-wide aging signals in the zebra shark (Stegostoma tigrinum), a long-lived elasmobranch of conservation concern, from whole-genome enzymatic methyl-sequencing of whole blood. Using a cohort of 51 known-age aquarium-bred individuals, we develop several epigenetic clock models capable of predicting chronological age with a median absolute error of 1.03–1.99 years (3.32%–6.42% of lifespan) based on the methylation status of as few as ten cytosines. We further apply our models to 19 individuals of unknown age originating from the wild. By profiling the broader age-associated methylome we demonstrate that these patterns not only predict age with high accuracy but also exhibit striking similarities in their genomic distributions to those observed in mammals pointing to conservation of the processes underlying epigenetic aging across vertebrates.

細胞遺伝子工学
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