ドライバー遺伝子変異によらない肝がん発症機構を解明 ーYAP1によるDNA脱メチル化が複数のがん原遺伝子を活性化ー

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2026-09-17 東京科学大学

YAP1を活性化したマウス肝がんモデルを用い、典型的なドライバー遺伝子変異を伴わずに肝細胞がん(HCC)が発症する機構を解析した。研究チームは、YAP1–TEAD複合体がDNA脱メチル化酵素TET1の発現を高め、約4万か所のCpG部位の低メチル化を引き起こすことを発見した。その結果、Myc、Bcl2、Stat3、Braf、Hrasなど1,000を超える遺伝子の発現が上昇し、腫瘍形成が促進された。TET1を抑制すると腫瘍形成が減少したことから、この経路の重要性が示された。さらに、単一細胞解析から、TET1と脱メチル化標的遺伝子の発現が高いHCC細胞集団の存在を確認。ヒトのフォンタン術後肝疾患でも同様の分子変化が認められ、DNA変異だけでは説明できない肝がん発症機構の存在が示唆された。

ドライバー遺伝子変異によらない肝がん発症機構を解明 ーYAP1によるDNA脱メチル化が複数のがん原遺伝子を活性化ー
図1. 本研究の仮説

<関連情報>

YAP1は、典型的なドライバー遺伝子変異ではなく、DNA脱メチル化を介して肝細胞癌を誘発する YAP1 induces hepatocellular carcinoma via DNA demethylation rather than by canonical driver gene mutations

Misaki Kosaka, Yoshimi Okamoto-Uchida, Haruka Hirose, Yuya Nagaoka, Norio Miyamura, Akinori Kanai, Daiki Hatakeyama, Michiko Nakagawa, Miki Nishio, Tomohiko Maehama, Akira Suzuki, Yutaka Suzuki, Teppei Shimamura & Hiroshi Nishina
Communications Biology  Published:17 September 2026
DOI:https://doi.org/10.1038/s42003-026-10882-w

Abstract

Large-scale genome sequencing analyses have identified driver gene mutations (DGMs) in most cancers as well as their associated tumorigenic mechanisms. However, a small fraction of cancers are not positive for these canonical DGMs, leaving the mechanisms underpinning their formation a mystery. We hypothesized that canonical DGM-negative cancers might be driven by activation of the transcriptional coactivator YAP1 that led to the induction of epigenetic changes. To test this theory, we established a mouse mosaic model of hepatocellular carcinoma (HCC) in which we induced YAP1-TEAD activation in a few hepatocytes. Whole-exome sequencing did not identify canonical DGMs in HCCs, but bisulfite sequencing revealed widespread DNA demethylation leading to the transcriptional activation of multiple oncogenes. Knockdown of the DNA demethylation-promoting gene, Tet1, attenuated HCC formation in these mice. Single-cell spatial transcriptomics identified a Tet1-high subpopulation of HCC cells that interacted with other hepatic cell types. Our mechanistic mouse data align with the observation that YAP1–TEAD–TET1-associated signatures were also elevated in hepatocytes from patients with Fontan-associated liver disease (FALD), a condition associated with the development of HCCs with lower frequencies of canonical DGMs. Our study suggests that the YAP1-TEAD-TET1 axis promotes canonical DGM-negative HCC development, and provides new insights into the molecular processes involved.

細胞遺伝子工学
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